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Description
The MSigDB Perturbation ontology contains gene sets that represent gene expression signatures of genetic and chemical perturbations. A number of these gene sets come in pairs: an xxx_UP (xxx_DN)
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gene
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set
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representing
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genes
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induced
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(repressed)
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by
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the
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perturbation.
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Statistics
The human hg19 ontology contains 2,374
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gene
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sets,
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16,150
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genes,
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and
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238,746
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associations.
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The
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human
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hg18
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ontology
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contains
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2,374
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gene
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sets,
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16,153
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genes,
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and
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238,720
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associations.
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The
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mouse
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mm9
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ontology
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contains
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2,373
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gene
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sets,
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14,631
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genes,
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and
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221,705
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associations.
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Download
All data for this ontology was downloaded on September 30, 2010 (MSigDB version 3.0).
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GREAT
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v1.2
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GREAT
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v1.2
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MSigDB
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Perturbation
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statistics
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are
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...
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.